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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
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Fecha : |
19/09/2014 |
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Actualizado : |
23/10/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
ALEM, D.; NARANCIO, R.; DIAZ, P.; REBUFFO, M.; ZARZA, R.; DALLA RIZZA, M. |
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Afiliación : |
DIEGO MARTIN ALEM GLISON, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; RAFAEL NARANCIO FERES, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; PAOLA ALEXANDRA DIAZ DELLAVALLE, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; MONICA IRENE REBUFFO GFELLER, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; RODRIGO TABARE ZARZA FUENTES, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; MARCO DALLA RIZZA VILARO, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay. |
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Título : |
Molecular characterization of Lotus corniculatus cultivars using transferable microsatellite markers. |
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Fecha de publicación : |
2011 |
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Fuente / Imprenta : |
Ciencia e Investigación Agraria, Santiago de Chile, v. 38, n. 3, p. 463-471, 2011. |
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ISSN : |
0304-5609 |
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DOI : |
10.4067/S0718-16202011000300015 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received September 7 2010. /Accepted June 21, 2011. |
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Contenido : |
Abstract :Lotus corniculatus L. is the most important agricultural species in the genus Lotus and is the most widely distributed Lotus species worldwide. L. corniculatus genotypes form complex groups that are difficult to recognize both morphologically and biochemically. Given the extensive and expensive process of isolating Simple Sequence Repeats (SSR, also called microsatellites), the possibility of using microsatellites already identified in related species is highly attractive. The aim of this work was the identification and validation of transferable microsatellite markers in L. corniculatus, and using those markers to study the genetic variability among four cultivars. Each cultivar of L. corniculatus was represented by 15 genotypes. Ten microsatellite markers were evaluated, and from those, four were selected based on their discriminative values observed among cultivars. We detected 29 alleles for the four markers, and there was an average of 7.25 alleles per locus. The marker TM0197 had the fewest number of alleles (5) and TM0083 had the highest number of alleles (10). The polymorphic information content (PIC) for the selected markers varied from 0.19 to 0.35, and the markers were therefore classified as highly informative. Based on the markers, we found high variability between individuals of the same cultivar. The use of transferable microsatellite markers could be useful to differentiate individuals at a relatively low cost, showing a great potential for use in breeding programs. MenosAbstract :Lotus corniculatus L. is the most important agricultural species in the genus Lotus and is the most widely distributed Lotus species worldwide. L. corniculatus genotypes form complex groups that are difficult to recognize both morphologically and biochemically. Given the extensive and expensive process of isolating Simple Sequence Repeats (SSR, also called microsatellites), the possibility of using microsatellites already identified in related species is highly attractive. The aim of this work was the identification and validation of transferable microsatellite markers in L. corniculatus, and using those markers to study the genetic variability among four cultivars. Each cultivar of L. corniculatus was represented by 15 genotypes. Ten microsatellite markers were evaluated, and from those, four were selected based on their discriminative values observed among cultivars. We detected 29 alleles for the four markers, and there was an average of 7.25 alleles per locus. The marker TM0197 had the fewest number of alleles (5) and TM0083 had the highest number of alleles (10). The polymorphic information content (PIC) for the selected markers varied from 0.19 to 0.35, and the markers were therefore classified as highly informative. Based on the markers, we found high variability between individuals of the same cultivar. The use of transferable microsatellite markers could be useful to differentiate individuals at a relatively low cost, showing a great potential for use in b... Presentar Todo |
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Palabras claves : |
GENETIC VARIABILITY; LOTUS JAPONICUS; MICROSATELLITES; SIMPLE SEQUENCE REPEATS; SSR; VARIABILIDAD GENÉTICA. |
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Thesagro : |
CULTIVOS. |
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Asunto categoría : |
F01 Cultivo |
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URL : |
http://www.scielo.cl/pdf/ciagr/v38n3/art15.pdf
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Marc : |
LEADER 02470naa a2200301 a 4500
001 1050403
005 2019-10-23
008 2011 bl uuuu u00u1 u #d
022 $a0304-5609
024 7 $a10.4067/S0718-16202011000300015$2DOI
100 1 $aALEM, D.
245 $aMolecular characterization of Lotus corniculatus cultivars using transferable microsatellite markers.$h[electronic resource]
260 $c2011
500 $aArticle history: Received September 7 2010. /Accepted June 21, 2011.
520 $aAbstract :Lotus corniculatus L. is the most important agricultural species in the genus Lotus and is the most widely distributed Lotus species worldwide. L. corniculatus genotypes form complex groups that are difficult to recognize both morphologically and biochemically. Given the extensive and expensive process of isolating Simple Sequence Repeats (SSR, also called microsatellites), the possibility of using microsatellites already identified in related species is highly attractive. The aim of this work was the identification and validation of transferable microsatellite markers in L. corniculatus, and using those markers to study the genetic variability among four cultivars. Each cultivar of L. corniculatus was represented by 15 genotypes. Ten microsatellite markers were evaluated, and from those, four were selected based on their discriminative values observed among cultivars. We detected 29 alleles for the four markers, and there was an average of 7.25 alleles per locus. The marker TM0197 had the fewest number of alleles (5) and TM0083 had the highest number of alleles (10). The polymorphic information content (PIC) for the selected markers varied from 0.19 to 0.35, and the markers were therefore classified as highly informative. Based on the markers, we found high variability between individuals of the same cultivar. The use of transferable microsatellite markers could be useful to differentiate individuals at a relatively low cost, showing a great potential for use in breeding programs.
650 $aCULTIVOS
653 $aGENETIC VARIABILITY
653 $aLOTUS JAPONICUS
653 $aMICROSATELLITES
653 $aSIMPLE SEQUENCE REPEATS
653 $aSSR
653 $aVARIABILIDAD GENÉTICA
700 1 $aNARANCIO, R.
700 1 $aDIAZ, P.
700 1 $aREBUFFO, M.
700 1 $aZARZA, R.
700 1 $aDALLA RIZZA, M.
773 $tCiencia e Investigación Agraria, Santiago de Chile$gv. 38, n. 3, p. 463-471, 2011.
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Registro original : |
INIA La Estanzuela (LE) |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha actual : |
24/10/2014 |
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Actualizado : |
24/06/2021 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
C - 0 |
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Autor : |
LARRAÑAGA, P.; DIAZ, P.; CABRERA, A.; ALEM, D.; ALMEIDA SOUZA, A.L.; GIOVANNI DE SIMONE, S.; DALLA RIZZA, M. |
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Afiliación : |
PATRICIA LUCIA LARRAÑAGA LUZ, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; PAOLA ALEXANDRA DIAZ DELLAVALLE, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; ANDREA CECILIA CABRERA BARRIOS, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; DIEGO MARTIN ALEM GLISON, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; MARCO DALLA RIZZA VILARO, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay. |
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Título : |
Activity of naturally derived antimicrobial peptides against filamentous fungi relevant for agriculture . |
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Fecha de publicación : |
2012 |
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Fuente / Imprenta : |
Sustainable Agriculture Research, 2012, v. 1, no.2, p. 211-221. |
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ISSN : |
1927-0518 |
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DOI : |
http://dx.doi.org/10.5539/sar.v1n2p211 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: June 12, 2012 / Accepted: July 10, 2012 / Online Published: July 23, 2012. |
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Contenido : |
ABSTRACT.
The search for environmentally biocompatible and cost-effective methods to control filamentous fungi in agriculture is becoming increasingly urgent. In vitro antimicrobial activity of three synthetic peptides was investigated against some filamentous fungi with agricultural relevance. The peptides were an analog of Temporin called Temporizina, a fragment from Pleurocidin termed Plc-2, and a peptide identified from sesame seeds named Pses3. Antimicrobial activity of these peptides towards filamentous fungi has not been previously reported. Seven plant pathogenic or mycotoxigenic fungal species, isolated from plant tissues were assayed: Alternaria solani, Colletotrichum gloesporioides, Fulvia fulvum, Fusarium oxisporum, Aspergillus niger, A.
ochraceus and Penicillium digitatum. Values of Minimum Inhibitory Concentration (MIC) and Minimum Fungicidal Concentration (MFC) were determined and compared with the commercially available fungicide Captan as a positive control. The peptides showing greatest inhibition were Pses3 and Plc-2 and C.
gloesporioides was the most sensitive of the evaluated fungi. The MIC values for Plc-2 and Pses3 peptides ranged from 0.64 µM to 10.25 µM. These values were much lower than those observed for Captan, suggesting the potential of these peptides as fungicides. In particular, Pses3 is a novel peptide derived from sesame seeds not reported in databases. |
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Palabras claves : |
PÉPTIDOS ANTIMICROBIANOS. |
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Thesagro : |
ACTIVIDAD ANTIMICROBIANA; BIOTECNOLOGIA; PÉPTIDOS. |
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Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/3626/1/Dalla-Rizza-M.-2012.-Sust.Agr.Res..12-p.211-221.pdf
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Marc : |
LEADER 02358naa a2200277 a 4500
001 1051277
005 2021-06-24
008 2012 bl uuuu u00u1 u #d
022 $a1927-0518
024 7 $ahttp://dx.doi.org/10.5539/sar.v1n2p211$2DOI
100 1 $aLARRAÑAGA, P.
245 $aActivity of naturally derived antimicrobial peptides against filamentous fungi relevant for agriculture .$h[electronic resource]
260 $c2012
500 $aArticle history: Received: June 12, 2012 / Accepted: July 10, 2012 / Online Published: July 23, 2012.
520 $aABSTRACT. The search for environmentally biocompatible and cost-effective methods to control filamentous fungi in agriculture is becoming increasingly urgent. In vitro antimicrobial activity of three synthetic peptides was investigated against some filamentous fungi with agricultural relevance. The peptides were an analog of Temporin called Temporizina, a fragment from Pleurocidin termed Plc-2, and a peptide identified from sesame seeds named Pses3. Antimicrobial activity of these peptides towards filamentous fungi has not been previously reported. Seven plant pathogenic or mycotoxigenic fungal species, isolated from plant tissues were assayed: Alternaria solani, Colletotrichum gloesporioides, Fulvia fulvum, Fusarium oxisporum, Aspergillus niger, A. ochraceus and Penicillium digitatum. Values of Minimum Inhibitory Concentration (MIC) and Minimum Fungicidal Concentration (MFC) were determined and compared with the commercially available fungicide Captan as a positive control. The peptides showing greatest inhibition were Pses3 and Plc-2 and C. gloesporioides was the most sensitive of the evaluated fungi. The MIC values for Plc-2 and Pses3 peptides ranged from 0.64 µM to 10.25 µM. These values were much lower than those observed for Captan, suggesting the potential of these peptides as fungicides. In particular, Pses3 is a novel peptide derived from sesame seeds not reported in databases.
650 $aACTIVIDAD ANTIMICROBIANA
650 $aBIOTECNOLOGIA
650 $aPÉPTIDOS
653 $aPÉPTIDOS ANTIMICROBIANOS
700 1 $aDIAZ, P.
700 1 $aCABRERA, A.
700 1 $aALEM, D.
700 1 $aALMEIDA SOUZA, A.L.
700 1 $aGIOVANNI DE SIMONE, S.
700 1 $aDALLA RIZZA, M.
773 $tSustainable Agriculture Research, 2012$gv. 1, no.2, p. 211-221.
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